I've always considered myself a geek, but this programming piece has me feeling a little skiddish and insignificant!

I'm a newbie in the RA work (RA+) and just got my system setup a week ago. I don't have any adapters or modules yet, but I will be looking to get the wireless one in Feb. When I use the wizard to code setup for my lights, I am getting some funky irregularities. I can set on and off times, but it only want to work on occasion.
My questions/issues of concern:
First, the other day the system just completely shut itself off and turned off anything attached to it. It was like it just lost power, display was dead, no power to anything in the unit. Everything I plugged into the outlet worked. I unplugged everything, put it all into a normal power bar and all my equipment was ok. I looked at the module and power box and nothing seemed to be wrong. Next morning I hooked everything back up and it has worked fine.
I unscrewed the unit and there appears to be a small singe type mark on the primary board attached to the joystick. When I plugged it back in, the display was asci characters until I re-ran the wizard and the display seemed to correct itself. I took a fine bristle brush (dry) and gently cleaned it off. So far so good. Ill keep an eye on this and send it back if it continues.
Secondly, my lighting. I am in the process of changing to LED's, but I currently have a Aqualife pro 72 MH(3x150)T5 combo. My lighting works well except for moon light (4 led's built into the system (Plug 1) and a modular LED light bar plugged into port 2. (actinics are on 2 and MH/T5 are on 4) When I put in the code for
Its not exactly right, I'm trying to do this from memory while on break at work
(Moon Lights)
StandardLights ... port1 (,5,00,9,00) ;(19,00,22,00) ;
StandardLights ... port2 (,5,45,9,00) ;(19,00,22,45) ;
etc...
The lights will turn on and off at the correct times, until Saturday, when they didn't want to come on any more in the evening. I reloaded the base program, ran the wizard and then edited the code again, it wouldn't work. (Note, this is after the unit mysteriously shut itself off.)
Do you think there is a problem with the controller?